Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EHI74623.1Putative transcriptional regulatory protein CiaR. (224 aa)    
Predicted Functional Partners:
ciaH
Sensor histidine kinase CiaH.
 
 0.999
EHI74581.1
Sensor histidine kinase.
 
 0.999
htrA
Serine protease do-like HtrA.
  
  
 0.993
EHI74813.1
Hypothetical protein.
 
 0.893
EHI73766.1
Sensor histidine kinase.
 
 0.855
EHI74106.1
Hypothetical protein.
  
  0.844
EHI75043.1
Sensory box sensor histidine kinase.
 0.798
EHI73456.1
Sensor histidine kinase.
 
 0.777
EHI73717.1
Hypothetical protein.
  
  0.703
argG
Putative argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
  
 0.657
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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