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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI74166.1ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. (318 aa)    
Predicted Functional Partners:
EHI74651.1
Carbohydrate uptake 2 (CUT2) family, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.997
EHI75546.1
Sugar ABC transporter, ATP-binding protein.
 
 0.994
EHI73738.1
Membrane protein, Bmp family.
 
 
 0.972
cdd
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
  
  
 0.464
deoC
Putative Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
  
  
 0.462
pulA
Pullulanase, type I; Belongs to the glycosyl hydrolase 13 family.
       0.453
pdp
Pyrimidine-nucleoside phosphorylase.
     
 0.441
EHI73644.1
Methyltransferase domain protein.
       0.427
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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