Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI74189.1Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (385 aa)    
Predicted Functional Partners:
EHI74640.1
Hypothetical protein.
 
 
 0.999
EHI73678.1
ABC transporter, ATP-binding protein.
 
 
 0.992
EHI75115.1
Putative membrane protein.
  
 
 0.821
EHI75296.1
Putative membrane protein.
  
 
 0.821
EHI75543.1
ABC transporter, permease family protein.
  
 
 0.821
EHI73530.1
Macrolide efflux ABC transporter, permease/ATP-binding family protein.
 
 
 0.756
EHI74109.1
Hypothetical protein.
 
 
 0.752
EHI75160.1
Putative PTS system glucose-specific EIICBA component.
     
 0.659
EHI73579.1
PTS system, trehalose-specific IIBCA component.
     
 0.659
scrA
PTS system, sucrose-specific, EIIBCA component.
     
 0.659
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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