Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EHI73348.1Putative membrane protein. (410 aa)    
Predicted Functional Partners:
celC
Cellobiose PTS family porter IIA component.
 
 
 0.969
lacF
Lactose-specific phosphotransferase enzyme IIA component.
 
 
 0.941
EHI73973.1
Hypothetical protein.
 
     0.920
celB
Cellobiose PTS family porter IIB component.
 
 
 0.908
lacE
PTS system lactose-specific EIICB component.
 
 
 0.782
EHI74656.1
Hypothetical protein.
 
 
 0.728
ptsH
Phosphocarrier protein HPr.
    
  0.656
EHI73669.1
Hypothetical protein.
 
  
 0.655
EHI74904.1
Hypothetical protein.
 
    0.608
celA
6-phospho-beta-glucosidase CelA; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.543
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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