Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EHI74653.1ABC transporter, substrate-binding family protein. (282 aa)    
Predicted Functional Partners:
EHI74521.1
Amino acid ABC transporter, permease family protein.
 0.984
EHI73945.1
Amino acid ABC transporter, permease protein.
 0.965
EHI75470.1
ABC transporter, substrate-binding protein.
  
 
 
0.950
tcyC
L-cystine ABC transporter, ATP-binding protein.
 
 
 0.878
EHI75041.1
Amino acid ABC transporter, permease family protein.
  0.878
EHI74585.1
Amino acid ABC transporter, ATP-binding protein.
 
 
 0.877
EHI74571.1
Amino acid ABC transporter, permease protein.
  0.826
EHI74920.1
Amino acid ABC transporter, permease protein.
 
  0.825
EHI75291.1
Hypothetical protein.
 
     0.808
EHI74605.1
Hypothetical protein.
  
    0.802
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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