Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI75543.1ABC transporter, permease family protein. (873 aa)    
Predicted Functional Partners:
EHI74555.1
ABC transporter, ATP-binding protein.
 
 0.996
EHI75412.1
ABC transporter, ATP-binding protein.
 
 0.985
EHI74856.1
ABC transporter, ATP-binding protein.
 
 0.985
EHI73530.1
Macrolide efflux ABC transporter, permease/ATP-binding family protein.
  
 0.975
EHI73527.1
ABC transporter, ATP-binding protein.
 
 0.948
EHI73946.1
ABC transporter, ATP-binding protein.
  
 0.940
EHI73678.1
ABC transporter, ATP-binding protein.
  
 0.940
EHI74109.1
Hypothetical protein.
  
 0.940
EHI73391.1
Hypothetical protein.
  
 0.940
EHI75039.1
PspC domain protein.
  
 
 0.848
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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