Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI74109.1Hypothetical protein. (110 aa)    
Predicted Functional Partners:
EHI75115.1
Putative membrane protein.
  
 0.940
EHI75296.1
Putative membrane protein.
  
 0.940
EHI75543.1
ABC transporter, permease family protein.
  
 0.940
EHI74640.1
Hypothetical protein.
 0.927
EHI75374.1
Homoserine kinase family protein.
  
  
  0.771
EHI74189.1
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.752
EHI74749.1
Hypothetical protein; Identified by glimmer; putative.
       0.752
EHI74026.1
Hypothetical protein.
  
  0.739
EHI74901.1
Amino acid ABC transporter, ATP-binding protein.
  
     0.638
ecsA
ABC transporter, ATP-binding protein.
  
 
  0.632
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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