Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI74434.1Hypothetical protein. (228 aa)    
Predicted Functional Partners:
EHI74813.1
Hypothetical protein.
 
 0.981
EHI73766.1
Sensor histidine kinase.
 0.911
EHI74106.1
Hypothetical protein.
  
  0.823
EHI73717.1
Hypothetical protein.
  
  0.787
ciaH
Sensor histidine kinase CiaH.
 
  0.773
EHI74581.1
Sensor histidine kinase.
 
 0.767
EHI73456.1
Sensor histidine kinase.
 
 0.753
EHI75043.1
Sensory box sensor histidine kinase.
 
 0.721
EHI73867.1
Hypothetical protein.
  
     0.670
EHI74472.1
Putative membrane protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
  
     0.647
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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