Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI74004.1Transcriptional regulator, MarR family. (142 aa)    
Predicted Functional Partners:
EHI74510.1
Efflux ABC transporter, permease/ATP-binding protein.
 
   
 0.853
EHI74768.1
Efflux ABC transporter, permease/ATP-binding protein.
 
     0.834
EHI75160.1
Putative PTS system glucose-specific EIICBA component.
   
 
 0.668
EHI73579.1
PTS system, trehalose-specific IIBCA component.
   
 
 0.668
scrA
PTS system, sucrose-specific, EIIBCA component.
   
 
 0.668
bglP
PTS system beta-glucoside-specific EIIBCA component.
   
 
 0.668
EHI73643.1
PTS system, beta-glucoside-specific, IIABC component.
   
 
 0.668
EHI75087.1
PTS system, beta-glucoside-specific, IIABC component.
   
 
 0.668
EHI74912.1
Putative PTS system beta-glucoside-specific EIIBCA component.
   
 
 0.668
EHI75536.1
5'-nucleotidase family protein.
    
  0.554
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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