Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI74832.1Hypothetical protein. (113 aa)    
Predicted Functional Partners:
EHI75573.1
enoyl-CoA hydratase/isomerase family protein.
  
 
 0.676
EHI74800.1
Acyl-coenzyme A thioesterase PaaI family protein.
  
 
 0.663
EHI73506.1
NifU family protein.
  
  
 0.599
sufC
FeS assembly ATPase SufC.
 
  
 0.569
ilvD
Putative Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
       0.563
sufD
FeS assembly protein SufD.
 
   
 0.425
csdB
Selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
  
 0.400
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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