EHI74199.1 protein (Streptococcus criceti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

EHI74199.1

NADPH-dependent FMN reductase domain protein. (201 aa)

Predicted Functional Partners:

EHI75108.1

0.776

EHI73960.1

0.744

EHI73394.1

0.499

EHI73948.1

0.498

rpmE

0.485

EHI74357.1

0.447

EHI75146.1

0.447

EHI74556.1

0.402

Your Current Organism:

Streptococcus criceti

NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EHI73394.1	EHI73948.1	STRCR_2063	STRCR_1252	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop.	Hypothetical protein.	0.621
EHI73394.1	EHI74199.1	STRCR_2063	STRCR_1970	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop.	NADPH-dependent FMN reductase domain protein.	0.499
EHI73394.1	EHI74357.1	STRCR_2063	STRCR_1535	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop.	Hypothetical protein.	0.846
EHI73394.1	EHI75146.1	STRCR_2063	STRCR_1747	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop.	Bacterial luciferase family protein.	0.691
EHI73948.1	EHI73394.1	STRCR_1252	STRCR_2063	Hypothetical protein.	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop.	0.621
EHI73948.1	EHI73960.1	STRCR_1252	STRCR_1969	Hypothetical protein.	ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.	0.900
EHI73948.1	EHI74199.1	STRCR_1252	STRCR_1970	Hypothetical protein.	NADPH-dependent FMN reductase domain protein.	0.498
EHI73948.1	EHI74357.1	STRCR_1252	STRCR_1535	Hypothetical protein.	Hypothetical protein.	0.515
EHI73948.1	EHI74556.1	STRCR_1252	STRCR_1968	Hypothetical protein.	DHH family protein.	0.426
EHI73948.1	EHI75146.1	STRCR_1252	STRCR_1747	Hypothetical protein.	Bacterial luciferase family protein.	0.515
EHI73960.1	EHI73948.1	STRCR_1969	STRCR_1252	ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.	Hypothetical protein.	0.900
EHI73960.1	EHI74199.1	STRCR_1969	STRCR_1970	ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.	NADPH-dependent FMN reductase domain protein.	0.744
EHI73960.1	EHI74556.1	STRCR_1969	STRCR_1968	ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.	DHH family protein.	0.846
EHI73960.1	EHI75108.1	STRCR_1969	STRCR_1971	ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.	NADPH-dependent FMN reductase domain protein.	0.876
EHI73960.1	rpmE	STRCR_1969	STRCR_1972	ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.	50S ribosomal protein L31 type B.	0.591
EHI74199.1	EHI73394.1	STRCR_1970	STRCR_2063	NADPH-dependent FMN reductase domain protein.	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop.	0.499
EHI74199.1	EHI73948.1	STRCR_1970	STRCR_1252	NADPH-dependent FMN reductase domain protein.	Hypothetical protein.	0.498
EHI74199.1	EHI73960.1	STRCR_1970	STRCR_1969	NADPH-dependent FMN reductase domain protein.	ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.	0.744
EHI74199.1	EHI74357.1	STRCR_1970	STRCR_1535	NADPH-dependent FMN reductase domain protein.	Hypothetical protein.	0.447
EHI74199.1	EHI74556.1	STRCR_1970	STRCR_1968	NADPH-dependent FMN reductase domain protein.	DHH family protein.	0.402