STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI73437.1DNA-binding response regulator. (198 aa)    
Predicted Functional Partners:
EHI75218.1
Sensor histidine kinase.
 0.999
EHI75247.1
Sensor histidine kinase.
 
 0.944
EHI74608.1
ABC transporter, permease family protein.
 
  
 0.924
EHI74236.1
ABC transporter, ATP-binding protein.
    0.840
EHI75373.1
DNA-binding response regulator.
  
 
 0.529
EHI74581.1
Sensor histidine kinase.
  
 0.492
EHI73766.1
Sensor histidine kinase.
  
 0.480
EHI74813.1
Hypothetical protein.
  
 0.480
EHI73425.1
Transcriptional regulator, LuxR family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop.
  
  
  0.439
stk
Serine/threonine protein kinase Stk1.
 
   
 0.415
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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