Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EHI74229.1Putative membrane protein. (312 aa)    
Predicted Functional Partners:
EHI74433.1
Putative NAD-dependent malic enzyme 3.
 
  
 0.950
cinI
Feruloyl esterase.
       0.779
EHI73589.1
Hypothetical protein.
       0.618
gshR
Glutathione-disulfide reductase.
   
  
 0.483
EHI75088.1
Malolactic fermentation system transcriptional activator family protein; Belongs to the LysR transcriptional regulatory family.
 
   
 0.456
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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