Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bcrABacitracin ABC transporter, ATP-binding protein BcrA. (302 aa)    
Predicted Functional Partners:
EHI74959.1
Putative membrane protein; Overlaps another CDS with the same product name.
 
 
  0.947
EHI75333.1
Putative membrane protein; Overlaps another CDS with the same product name.
 
 
  0.927
EHI74771.1
Putative membrane protein.
 
 
  0.815
EHI73717.1
Hypothetical protein.
 
     0.794
EHI75505.1
Hypothetical protein.
 
  
 0.689
EHI73901.1
Hypothetical protein.
 
 
  0.669
mutG
Antibiotic ABC transporter protein MutG.
 
 
 0.666
mutE
Mutacin ABC transporter protein, MutE.
 
 
 0.657
EHI74387.1
Hypothetical protein.
     
  0.656
EHI75132.1
Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
  
   0.514
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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