Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EHI73450.1Hydrolase, haloacid dehalogenase-like family protein. (273 aa)    
Predicted Functional Partners:
EHI74152.1
Cof family protein.
 
    
0.889
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
       0.758
EHI75416.1
Hydrolase, haloacid dehalogenase-like family protein.
  
 
 
0.618
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
  
    0.504
EHI75160.1
Putative PTS system glucose-specific EIICBA component.
    
  0.471
EHI73579.1
PTS system, trehalose-specific IIBCA component.
    
  0.471
scrA
PTS system, sucrose-specific, EIIBCA component.
    
  0.471
bglP
PTS system beta-glucoside-specific EIIBCA component.
    
  0.471
EHI73643.1
PTS system, beta-glucoside-specific, IIABC component.
    
  0.471
EHI75087.1
PTS system, beta-glucoside-specific, IIABC component.
    
  0.471
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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