Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI73434.1PTS system, sorbitol-specific IIB component. (99 aa)    
Predicted Functional Partners:
EHI74486.1
PTS system, IIA component family protein.
 
 
  0.999
EHI74554.1
PTS system, galactitol-specific, IIC component.
 
 
 0.998
EHI73990.1
PTS system, galactitol-specific IIC component family protein.
 
 
 0.936
EHI75450.1
Hypothetical protein.
 
 
  0.928
ptsH
Phosphocarrier protein HPr.
    
  0.887
EHI75196.1
Putative L-iditol 2-dehydrogenase.
 
 
  0.877
EHI73752.1
Hypothetical protein.
 
 
  0.871
EHI73935.1
PTS system galactitol-specific enzyme IIB component family protein.
  
  
  0.769
EHI73761.1
Hypothetical protein.
 
 
 0.743
EHI75047.1
Hypothetical protein.
 
 
 0.720
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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