Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFU31088.1Efflux ABC transporter, permease protein; Pfam: PF02687; InterPro: IPR003838. (453 aa)    
Predicted Functional Partners:
lolD
ABC transporter, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
   
 0.945
EFU29298.1
Efflux ABC transporter, permease protein; Pfam: PF02687; InterPro: IPR003838.
  
  
 
0.895
EFU31082.1
Outer membrane protein, OMP85 family; Pfam: PF07244,PF01103; InterPro: IPR000184.
 
     0.770
EFU31627.1
Putative bacteriocin export ABC transporter, lactococcin 972 group; COG: COG1136; Pfam: PF00005; InterPro: IPR003593.
   
 0.703
EFU30917.1
ABC transporter, ATP-binding protein; COG: COG1136; Pfam: PF00005; InterPro: IPR003593.
   
 0.703
macB
ABC transporter, ATP-binding protein; COG: COG1136; Pfam: PF00005; InterPro: IPR003593.
   
 0.703
rbfA
Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.
       0.632
EFU31085.1
Outer membrane protein; Pfam: PF03938; InterPro: IPR005632.
 
     0.630
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
       0.622
EFU32002.1
ABC 3 transport family protein; COG: COG1108; Pfam: PF00950; InterPro: IPR001626.
     
 0.594
Your Current Organism:
Prevotella buccae
NCBI taxonomy Id: 873513
Other names: P. buccae ATCC 33574, Prevotella buccae ATCC 33574, Prevotella buccae CIP 105106, Prevotella buccae str. ATCC 33574, Prevotella buccae strain ATCC 33574
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