Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFU30042.1Peptidase C1-like family; Pfam: PF03051; Belongs to the peptidase C1 family. (400 aa)    
Predicted Functional Partners:
pepD3
Peptidase, M24 family; COG: COG0006; Pfam: PF00557; InterPro: IPR000994.
 
   
 0.783
pepC
Peptidase C1-like family; COG: COG3579; Pfam: PF03051; InterPro: IPR004134; Belongs to the peptidase C1 family.
  
  
  0.744
EFU30058.1
Peptidase, C69 family; Pfam: PF03577; InterPro: IPR005322.
 
     0.622
EFU30040.1
Phospholipase, patatin family; COG: COG4667; Pfam: PF01734; InterPro: IPR002641.
       0.610
EFU31431.1
Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
     0.595
EFU31588.1
Hydrolase, NUDIX family; Pfam: PF09297,PF00293; InterPro: IPR000086.
    
   0.500
nudC
Hydrolase, NUDIX family; COG: COG2816; Pfam: PF09296,PF09297,PF00293; InterPro: IPR000086.
    
   0.500
EFU29347.1
Peptidase, S9A/B/C family, catalytic domain protein; Pfam: PF07676,PF00326; InterPro: IPR011042.
  
     0.480
EFU30043.1
PhoH family protein; COG: COG1702; Pfam: PF02562; InterPro: IPR003714.
       0.468
purC-2
Phosphoribosylaminoimidazolesuccinocarboxamide synthase; COG: COG0152; Pfam: PF01259; InterPro: IPR001636; Belongs to the SAICAR synthetase family.
       0.468
Your Current Organism:
Prevotella buccae
NCBI taxonomy Id: 873513
Other names: P. buccae ATCC 33574, Prevotella buccae ATCC 33574, Prevotella buccae CIP 105106, Prevotella buccae str. ATCC 33574, Prevotella buccae strain ATCC 33574
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