STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFU29276.1Hypothetical protein; Pfam: PF04488; InterPro: IPR007577. (223 aa)    
Predicted Functional Partners:
EFU29272.1
Glycosyltransferase, group 1 family protein; COG: COG0438; Pfam: PF00534; InterPro: IPR001296.
  
    0.783
EFU29273.1
Hypothetical protein.
       0.783
EFU29275.1
Hypothetical protein.
       0.778
EFU29274.1
Glycosyltransferase, group 2 family protein; Pfam: PF00535; InterPro: IPR001173.
       0.773
EFU29271.1
Glycosyl hydrolase family 16; Pfam: PF00722; InterPro: IPR013320.
       0.731
EFU29277.1
Hypothetical protein.
       0.557
EFU29278.1
Hypothetical protein.
       0.556
EFU29269.1
Glycosyltransferase, WecB/TagA/CpsF family; COG: COG1922; Pfam: PF03808; InterPro: IPR004629; Belongs to the glycosyltransferase 26 family.
       0.555
EFU29270.1
Glycosyltransferase, WecB/TagA/CpsF family; Pfam: PF03808; InterPro: IPR004629; Belongs to the glycosyltransferase 26 family.
       0.555
EFU29279.1
Hypothetical protein.
       0.405
Your Current Organism:
Prevotella buccae
NCBI taxonomy Id: 873513
Other names: P. buccae ATCC 33574, Prevotella buccae ATCC 33574, Prevotella buccae CIP 105106, Prevotella buccae str. ATCC 33574, Prevotella buccae strain ATCC 33574
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.