STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001550155_03583Unannotated protein. (284 aa)    
Predicted Functional Partners:
GCA_001550155_01489
Unannotated protein.
  
     0.748
GCA_001550155_01298
Unannotated protein.
  
     0.728
GCA_001550155_03681
Unannotated protein.
  
     0.683
GCA_001550155_00948
Unannotated protein.
  
     0.613
GCA_001550155_03581
Unannotated protein.
       0.602
GCA_001550155_02722
Unannotated protein.
  
     0.576
GCA_001550155_01765
Unannotated protein.
  
     0.558
GCA_001550155_03582
Unannotated protein.
       0.555
GCA_001550155_00573
Unannotated protein.
  
     0.502
GCA_001550155_03980
Unannotated protein.
  
     0.501
Your Current Organism:
Pseudoalteromonas arabiensis
NCBI taxonomy Id: 874454
Other names: JCM 17292, NCIMB 14688, P. arabiensis, Pseudoalteromonas arabiensis Matsuyama et al. 2013, Pseudoalteromonas sp. k53, strain k53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.