STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF35237.1Transmembrane ATP-binding protein ABC transporter. (580 aa)    
Predicted Functional Partners:
AEF35236.1
Transmembrane ATP-binding protein ABC transporter.
 
   
0.919
AEF35536.1
Transmembrane ATP-binding protein ABC transporter.
 
 
 
0.835
AEF35192.1
Antibiotic ABC transporter ATP-binding protein.
 
 0.734
fadD31-2
acyl-CoA ligase FadD31.
  
 
 0.710
AEF35845.1
Antibiotic resistance ABC transporter efflux system ATP-binding protein.
 
0.685
AEF36257.1
Antibiotic ABC transporter ATP-binding protein.
 
0.674
AEF37196.1
Transmembrane ATP-binding protein ABC transporter.
 
0.674
ppsD-2
Phenolpthiocerol synthesis type-I polyketide synthase PpsD.
  
 0.657
AEF34047.1
CBXX/CFQX family protein.
   
 0.656
AEF34290.1
Conserved hypothetical protein.
   
 0.656
Your Current Organism:
Mycolicibacter sinensis
NCBI taxonomy Id: 875328
Other names: M. sinensis, Mycobacterium sinense, Mycobacterium sinov, Mycobacterium sp. 506, Mycobacterium sp. JDM601, strain JDM601
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