Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEF35769.1 | AEF35770.1 | JDM601_1769 | JDM601_1770 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.976 |
AEF35769.1 | AEF35773.1 | JDM601_1769 | JDM601_1773 | Conserved hypothetical protein. | Dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.591 |
AEF35769.1 | cysQ | JDM601_1769 | JDM601_1771 | Conserved hypothetical protein. | Monophosphatase CysQ. | 0.804 |
AEF35769.1 | mshC | JDM601_1769 | JDM601_1772 | Conserved hypothetical protein. | cysteinyl-tRNA synthetase MshC; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.843 |
AEF35770.1 | AEF35769.1 | JDM601_1770 | JDM601_1769 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.976 |
AEF35770.1 | AEF35773.1 | JDM601_1770 | JDM601_1773 | Conserved hypothetical protein. | Dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.710 |
AEF35770.1 | cysQ | JDM601_1770 | JDM601_1771 | Conserved hypothetical protein. | Monophosphatase CysQ. | 0.804 |
AEF35770.1 | mshC | JDM601_1770 | JDM601_1772 | Conserved hypothetical protein. | cysteinyl-tRNA synthetase MshC; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.799 |
AEF35773.1 | AEF35769.1 | JDM601_1773 | JDM601_1769 | Dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Conserved hypothetical protein. | 0.591 |
AEF35773.1 | AEF35770.1 | JDM601_1773 | JDM601_1770 | Dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Conserved hypothetical protein. | 0.710 |
AEF35773.1 | cysQ | JDM601_1773 | JDM601_1771 | Dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Monophosphatase CysQ. | 0.684 |
AEF35773.1 | mshC | JDM601_1773 | JDM601_1772 | Dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | cysteinyl-tRNA synthetase MshC; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.839 |
AEF36561.1 | cysD | JDM601_2561 | JDM601_1279 | Conserved hypothetical protein. | Sulfate adenylyltransferase subunit 2 CysD. | 0.904 |
AEF36561.1 | cysH | JDM601_2561 | JDM601_1518 | Conserved hypothetical protein. | 3'-phosphoadenosine 5'-phosphosulfate reductase CysH; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.904 |
AEF36561.1 | cysN | JDM601_2561 | JDM601_1280 | Conserved hypothetical protein. | Bifunctional enzyme CysN/CysC: sulfate adenyltransferase (subunit 1) + adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.921 |
AEF36561.1 | cysQ | JDM601_2561 | JDM601_1771 | Conserved hypothetical protein. | Monophosphatase CysQ. | 0.923 |
AEF36561.1 | cysQ_1 | JDM601_2561 | JDM601_1281 | Conserved hypothetical protein. | Monophosphatase CysQ_1. | 0.911 |
cysD | AEF36561.1 | JDM601_1279 | JDM601_2561 | Sulfate adenylyltransferase subunit 2 CysD. | Conserved hypothetical protein. | 0.904 |
cysD | cysH | JDM601_1279 | JDM601_1518 | Sulfate adenylyltransferase subunit 2 CysD. | 3'-phosphoadenosine 5'-phosphosulfate reductase CysH; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.925 |
cysD | cysN | JDM601_1279 | JDM601_1280 | Sulfate adenylyltransferase subunit 2 CysD. | Bifunctional enzyme CysN/CysC: sulfate adenyltransferase (subunit 1) + adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.999 |
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