Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEF36002.1Metal-dependent phosphohydrolase. (216 aa)    
Predicted Functional Partners:
AEF36042.1
NAD-dependent epimerase/dehydratase.
 
     0.677
AEF36001.1
Beta subunit of phenylphosphate carboxylase.
       0.668
AEF36003.1
Transcriptional regulatory protein.
 
     0.634
pheT
phenylalanyl-tRNA synthetase beta chain PheT; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
  
 0.599
cinA
Competence/damage-inducible protein CinA; Belongs to the CinA family.
  
    0.541
gpsI
Bifunctional protein polyribonucleotide nucleotidyltransferase GpsI; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
 
 0.512
rpsO
30S ribosomal protein S15 RpsO; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
  
  
 0.498
gltB
Ferredoxin-dependent glutamate synthase.
       0.488
rnj
Hydrolase; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
  
 
 0.451
AEF36746.1
Conserved hypothetical protein.
 
    0.440
Your Current Organism:
Mycolicibacter sinensis
NCBI taxonomy Id: 875328
Other names: M. sinensis, Mycobacterium sinense, Mycobacterium sinov, Mycobacterium sp. 506, Mycobacterium sp. JDM601, strain JDM601
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