STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF37203.1Nitroreductase. (215 aa)    
Predicted Functional Partners:
AEF37204.1
MOSC domain-containing protein.
 
    0.786
AEF37286.1
Conserved hypothetical protein.
 
  
 0.692
AEF35659.1
Conserved hypothetical protein.
 
  
 0.607
dnaE2
DNA polymerase III alpha chain DnaE2; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.
       0.580
AEF34539.1
Glyoxalase.
 
  
 0.571
AEF34264.1
Conserved hypothetical protein.
 
  
 0.514
AEF35283.1
Conserved hypothetical protein.
 
  
 0.510
AEF34553.1
Conserved hypothetical protein.
  
     0.494
fadD31-2
acyl-CoA ligase FadD31.
  
 
 0.487
AEF34480.1
Beta-ketoacyl synthase.
  
 
 0.478
Your Current Organism:
Mycolicibacter sinensis
NCBI taxonomy Id: 875328
Other names: M. sinensis, Mycobacterium sinense, Mycobacterium sinov, Mycobacterium sp. 506, Mycobacterium sp. JDM601, strain JDM601
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