STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mmpL5Transmembrane transport protein MmpL5. (964 aa)    
Predicted Functional Partners:
mmpS4_2
Membrane protein MmpS4_2.
   
 
 0.857
AEF35302.1
Conserved hypothetical protein.
  
     0.711
AEF34298.1
Transmembrane protein.
  
   
 0.706
AEF36149.1
Conserved hypothetical protein.
  
     0.705
AEF37185.1
PPE family protein.
  
     0.688
AEF34291.1
Conserved hypothetical protein.
 
 
 
 0.674
AEF36148.1
Conserved hypothetical protein.
  
     0.607
AEF35398.1
Proline rich membrane protein.
  
     0.572
AEF34521.1
Conserved hypothetical protein.
  
     0.556
lprG
Lipoprotein LprG.
  
     0.553
Your Current Organism:
Mycolicibacter sinensis
NCBI taxonomy Id: 875328
Other names: M. sinensis, Mycobacterium sinense, Mycobacterium sinov, Mycobacterium sp. 506, Mycobacterium sp. JDM601, strain JDM601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.