Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEF34544.1 | AEF37779.1 | JDM601_0544 | JDM601_3779 | Conserved hypothetical protein. | HAD family hydrolase. | 0.478 |
AEF34544.1 | AEF37949.1 | JDM601_0544 | JDM601_3949 | Conserved hypothetical protein. | Membrane-associated serine protease. | 0.508 |
AEF34544.1 | fas | JDM601_0544 | JDM601_1383 | Conserved hypothetical protein. | Fatty acid synthase Fas. | 0.460 |
AEF34544.1 | htrA | JDM601_0544 | JDM601_1197 | Conserved hypothetical protein. | Serine protease HtrA (DegP protein). | 0.508 |
AEF34544.1 | pepA | JDM601_0544 | JDM601_0605 | Conserved hypothetical protein. | Serine protease PepA. | 0.508 |
AEF34544.1 | pepA-2 | JDM601_0544 | JDM601_4184 | Conserved hypothetical protein. | Serine protease PepA. | 0.508 |
AEF34544.1 | pepD | JDM601_0544 | JDM601_0934 | Conserved hypothetical protein. | Serine protease PepD. | 0.508 |
AEF37779.1 | AEF34544.1 | JDM601_3779 | JDM601_0544 | HAD family hydrolase. | Conserved hypothetical protein. | 0.478 |
AEF37779.1 | AEF37780.1 | JDM601_3779 | JDM601_3780 | HAD family hydrolase. | long-chain-fatty-acid-CoA ligase. | 0.785 |
AEF37779.1 | AEF37781.1 | JDM601_3779 | JDM601_3781 | HAD family hydrolase. | Conserved hypothetical protein. | 0.425 |
AEF37779.1 | AEF37949.1 | JDM601_3779 | JDM601_3949 | HAD family hydrolase. | Membrane-associated serine protease. | 0.547 |
AEF37779.1 | fadE2_1-2 | JDM601_3779 | JDM601_2515 | HAD family hydrolase. | acyl-CoA dehydrogenase FadE2_1. | 0.456 |
AEF37779.1 | fas | JDM601_3779 | JDM601_1383 | HAD family hydrolase. | Fatty acid synthase Fas. | 0.440 |
AEF37779.1 | htrA | JDM601_3779 | JDM601_1197 | HAD family hydrolase. | Serine protease HtrA (DegP protein). | 0.547 |
AEF37779.1 | pepA | JDM601_3779 | JDM601_0605 | HAD family hydrolase. | Serine protease PepA. | 0.547 |
AEF37779.1 | pepA-2 | JDM601_3779 | JDM601_4184 | HAD family hydrolase. | Serine protease PepA. | 0.547 |
AEF37779.1 | pepD | JDM601_3779 | JDM601_0934 | HAD family hydrolase. | Serine protease PepD. | 0.547 |
AEF37780.1 | AEF37779.1 | JDM601_3780 | JDM601_3779 | long-chain-fatty-acid-CoA ligase. | HAD family hydrolase. | 0.785 |
AEF37780.1 | AEF37781.1 | JDM601_3780 | JDM601_3781 | long-chain-fatty-acid-CoA ligase. | Conserved hypothetical protein. | 0.463 |
AEF37781.1 | AEF37779.1 | JDM601_3781 | JDM601_3779 | Conserved hypothetical protein. | HAD family hydrolase. | 0.425 |
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