Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMB92643.1NADH-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)    
Predicted Functional Partners:
AMB92344.1
Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
 
  
 0.708
AMB92294.1
Reduces fumarate to succinate in anaerobic bacterial respiration; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
 
  
 0.626
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
    0.499
recX
Hypothetical protein; Modulates RecA activity; Belongs to the RecX family.
       0.481
AMB92642.1
A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
       0.481
AMB92054.1
30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.442
AMB92640.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.435
AMB92636.1
Deacetylase SIR2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.423
AMB92296.1
Deacetylase SIR2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.422
AMB92633.1
Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.412
Your Current Organism:
Aerococcus christensenii
NCBI taxonomy Id: 87541
Other names: A. christensenii, Aerococcus sp. CCUG 28826, CCUG 28831, CIP 106115, DSM 15819, strain UWO6
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