STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000246925_00533Unannotated protein. (166 aa)    
Predicted Functional Partners:
GCA_000246925_00534
Unannotated protein.
 
    0.979
GCA_000246925_01623
Unannotated protein.
  
 
 0.889
GCA_000246925_00531
Unannotated protein.
       0.805
GCA_000246925_00532
Unannotated protein.
       0.791
GCA_000246925_00281
Unannotated protein.
 
   
 0.732
GCA_000246925_00530
Unannotated protein.
       0.728
GCA_000246925_00529
Unannotated protein.
       0.724
GCA_000246925_00528
Unannotated protein.
       0.722
GCA_000246925_00527
Unannotated protein.
       0.690
GCA_000246925_00525
Unannotated protein.
       0.689
Your Current Organism:
Peptoniphilus rhinitidis
NCBI taxonomy Id: 875454
Other names: P. rhinitidis 1-13, Peptoniphilus rhinitidis 1-13, Peptoniphilus rhinitidis str. 1-13, Peptoniphilus rhinitidis strain 1-13, Peptoniphilus sp. 1-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.