STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI23335.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (551 aa)    
Predicted Functional Partners:
KXI23337.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.995
KXI22287.1
Lactaldehyde reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.975
KXI22325.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.964
KXI22274.1
Aminotransferase class III; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.905
KXI23341.1
Phosphate propanoyltransferase; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
 
  
 0.890
KXI21106.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.877
KXI24102.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.842
cutC
Choline trimethylamine-lyase; Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde. Belongs to the glycyl radical enzyme (GRE) family. CutC subfamily.
 
 
 0.833
KXI21727.1
With YgfM and YgfN forms a selenate reductase, which seems to catalyze the reduction of selenate to selenite; YgfK mutants are unable to reduce selenate; involved in purine salvage process; seems to act as an oxidoreductase, but sequence similarity suggests it is a dihydrothymine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.823
KXI24557.1
NADH-ubiquinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.816
Your Current Organism:
Photobacterium sanguinicancri
NCBI taxonomy Id: 875932
Other names: CECT 7579, DSM 24670, P. sanguinicancri, Photobacterium sanguinicancri Gomez-Gil et al. 2016, Photobacterium sp. ME15, Photobacterium sp. Mj110, Photobacterium sp. Mj130, Photobacterium sp. Mj139, strain Mj110
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