STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR30258.1Putative lipoprotein; COG5633 Predicted periplasmic lipoprotein. (153 aa)    
Predicted Functional Partners:
EAR30259.1
Hypothetical protein; COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family).
  
  
 0.862
EAR30257.1
Putative lipoprotein; COG3014 Uncharacterized protein conserved in bacteria.
       0.790
SlyB
COG3133 Outer membrane lipoprotein.
       0.703
Hit
Member of HIT (histidine triad) family that contains Ap3A and Ap4A hydrolase; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases.
  
  
 0.674
EAR30233.1
Hypothetical protein; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases.
  
  
 0.499
EAR29021.1
Hypothetical protein.
  
  
 0.499
EAR29662.1
Putative HIT family hydrolase; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases.
  
  
 0.499
EAR30256.1
COG4807 Uncharacterized protein conserved in bacteria.
       0.476
EAR30261.1
COG0724 RNA-binding proteins (RRM domain).
       0.454
Your Current Organism:
Pseudoalteromonas tunicata
NCBI taxonomy Id: 87626
Other names: P. tunicata D2, Pseudoalteromonas sp. D2, Pseudoalteromonas tunicata D2, Pseudoalteromonas tunicata str. D2, Pseudoalteromonas tunicata strain D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.