STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR30442.1Hcp protein; COG3157 Hemolysin-coregulated protein (uncharacterized). (161 aa)    
Predicted Functional Partners:
EAR30443.1
COG3516 Uncharacterized protein conserved in bacteria.
 
 
 0.998
ImpC
COG3517 Uncharacterized protein conserved in bacteria.
 
 
 0.977
Hcp
Secreted protein Hcp; COG3157 Hemolysin-coregulated protein (uncharacterized).
 
  
 
0.975
ImpB
COG3516 Uncharacterized protein conserved in bacteria.
 
 
 0.974
ImpH
COG3520 Uncharacterized protein conserved in bacteria.
 
  
 0.961
ImpG
COG3519 Uncharacterized protein conserved in bacteria.
 
  
 0.961
ImpK
COG3455 Uncharacterized protein conserved in bacteria.
 
  
 0.954
VgrG
Rhs element Vgr protein; COG3501 Uncharacterized protein conserved in bacteria.
 
  
 0.953
EAR30444.1
COG3523 Uncharacterized protein conserved in bacteria.
 
  
 0.952
ImpJ
COG3522 Uncharacterized protein conserved in bacteria.
 
  
 0.951
Your Current Organism:
Pseudoalteromonas tunicata
NCBI taxonomy Id: 87626
Other names: P. tunicata D2, Pseudoalteromonas sp. D2, Pseudoalteromonas tunicata D2, Pseudoalteromonas tunicata str. D2, Pseudoalteromonas tunicata strain D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.