STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR30522.1Hypothetical protein. (227 aa)    
Predicted Functional Partners:
EAR30520.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.511
EAR27375.1
Putative TonB-dependent receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.432
EAR29982.1
Hypothetical TonB-dependent receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.427
EAR30523.1
Putative unknown membrane associated protein, GGDEF family of nucleotide cyclase/hydrolase; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
       0.405
Your Current Organism:
Pseudoalteromonas tunicata
NCBI taxonomy Id: 87626
Other names: P. tunicata D2, Pseudoalteromonas sp. D2, Pseudoalteromonas tunicata D2, Pseudoalteromonas tunicata str. D2, Pseudoalteromonas tunicata strain D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.