STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR30565.1Hypothetical protein; COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis. (110 aa)    
Predicted Functional Partners:
EAR29046.1
Putative orphan protein.
  
     0.674
EAR29754.1
Hypothetical protein; COG0538 Isocitrate dehydrogenases.
 
     0.595
EAR30564.1
Hypothetical protein.
       0.584
EAR30562.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
       0.514
BaeS
COG0642 Signal transduction histidine kinase.
       0.514
EAR29759.1
Hypothetical protein; COG0665 Glycine/D-amino acid oxidases (deaminating).
  
     0.502
EAR30561.1
Hypothetical protein; COG0466 ATP-dependent Lon protease, bacterial type.
       0.451
YbcJ
Hypothetical protein.
  
     0.445
Efp
COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A).
  
     0.433
EAR29705.1
Putative orphan protein.
  
     0.417
Your Current Organism:
Pseudoalteromonas tunicata
NCBI taxonomy Id: 87626
Other names: P. tunicata D2, Pseudoalteromonas sp. D2, Pseudoalteromonas tunicata D2, Pseudoalteromonas tunicata str. D2, Pseudoalteromonas tunicata strain D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.