STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR28980.1Hypothetical protein. (130 aa)    
Predicted Functional Partners:
EAR28978.1
COG4197 Uncharacterized protein conserved in bacteria, prophage-related.
       0.777
EAR28979.1
COG4068 Uncharacterized protein containing a Zn-ribbon.
       0.773
EAR28981.1
Hypothetical protein; COG0827 Adenine-specific DNA methylase.
       0.658
EAR28982.1
Hypothetical protein.
       0.555
EAR28983.1
ATP-dependent 26S proteasome regulatory subunit.
       0.548
EAR28984.1
Putative phage protein.
       0.538
EAR28977.1
Hypothetical protein; COG1396 Predicted transcriptional regulators.
       0.531
EAR28985.1
Putative orphan protein.
       0.527
EAR28986.1
Hypothetical protein.
       0.527
EAR28976.1
COG1396 Predicted transcriptional regulators.
       0.416
Your Current Organism:
Pseudoalteromonas tunicata
NCBI taxonomy Id: 87626
Other names: P. tunicata D2, Pseudoalteromonas sp. D2, Pseudoalteromonas tunicata D2, Pseudoalteromonas tunicata str. D2, Pseudoalteromonas tunicata strain D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.