STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR29165.1Hypothetical protein; COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases. (329 aa)    
Predicted Functional Partners:
EAR29166.1
Mannose-1-phosphate guanyltransferase-related protein; COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon).
 
 
 0.996
Gph-2
Putative phosphoglycolate phosphatase, contains a phosphatase-like domain; COG0546 Predicted phosphatases.
  
  
 0.946
NagZ-2
Beta-hexosaminidase; COG1472 Beta-glucosidase-related glycosidases.
 
  
 0.932
NagZ
COG1472 Beta-glucosidase-related glycosidases.
 
  
 0.920
glmU
Bifunctional: N-acetyl glucosamine-1-phosphate uridyltransferase (N-terminal); Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
    
 0.917
EAR30175.1
COG3525 N-acetyl-beta-hexosaminidase.
     
  0.900
EAR30180.1
COG3525 N-acetyl-beta-hexosaminidase.
     
  0.900
EAR28855.1
beta-N-acetylhexosaminidase; COG3525 N-acetyl-beta-hexosaminidase.
     
  0.900
EAR27531.1
Hypothetical protein; COG3325 Chitinase.
     
  0.900
EAR28269.1
Secreted chitinase; COG3979 Uncharacterized protein contain chitin-binding domain type 3.
     
  0.900
Your Current Organism:
Pseudoalteromonas tunicata
NCBI taxonomy Id: 87626
Other names: P. tunicata D2, Pseudoalteromonas sp. D2, Pseudoalteromonas tunicata D2, Pseudoalteromonas tunicata str. D2, Pseudoalteromonas tunicata strain D2
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