Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAR29475.1COG1664 Integral membrane protein CcmA involved in cell shape determination. (128 aa)    
Predicted Functional Partners:
EAR29474.1
Putative peptidase family M23/M37 protein; COG4942 Membrane-bound metallopeptidase.
 
   
 0.851
FahA
Fumarylacetoacetase (Fumarylacetoacetate hydrolase) (Beta-diketonase)(FAA); COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
       0.737
HppD
4-hydroxyphenylpyruvate dioxygenase (4HPPD) (HPD) (HPPDase); COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins.
       0.626
EAR29476.1
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
       0.601
EAR30661.1
COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation.
  
 
   0.421
Your Current Organism:
Pseudoalteromonas tunicata
NCBI taxonomy Id: 87626
Other names: P. tunicata D2, Pseudoalteromonas sp. D2, Pseudoalteromonas tunicata D2, Pseudoalteromonas tunicata str. D2, Pseudoalteromonas tunicata strain D2
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