STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR29684.1Putative Peptidylprolyl isomerase; COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family. (206 aa)    
Predicted Functional Partners:
EAR29369.1
Beta-ketoacyl synthase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 
 0.946
YajG
COG3056 Uncharacterized lipoprotein.
  
    0.879
EAR29352.1
Hypothetical protein; COG2091 Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
  
 
 0.828
rlmG
Putative ribosomal RNA small subunit methyltransferase D; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA.
       0.807
AmpG
Putative muropeptide transport protein (mFS family protein); Conserved in gamma-proteobacteria; COG0477 Permeases of the major facilitator superfamily.
  
    0.798
EAR29476.1
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
     0.722
EAR29681.1
Putative 2OG-Fe(II) oxygenase superfamily protein; COG3145 Alkylated DNA repair protein.
       0.697
BolA
Regulator protein; COG0271 Stress-induced morphogen (activity unknown); Belongs to the BolA/IbaG family.
       0.686
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity.
  
 0.637
kdkA
Putative lipopolysaccharide kinase family protein; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family.
   
 0.614
Your Current Organism:
Pseudoalteromonas tunicata
NCBI taxonomy Id: 87626
Other names: P. tunicata D2, Pseudoalteromonas sp. D2, Pseudoalteromonas tunicata D2, Pseudoalteromonas tunicata str. D2, Pseudoalteromonas tunicata strain D2
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