STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YcaOCOG1765 Predicted redox protein, regulator of disulfide bond formation. (751 aa)    
Predicted Functional Partners:
EAR27894.1
CAAX amino terminal protease family protein; COG1266 Predicted metal-dependent membrane protease.
  
  
 0.832
EAR27730.1
Putative intracellular septation protein; COG1266 Predicted metal-dependent membrane protease.
  
  
 0.659
EAR26884.1
Nitroreductase family protein; COG0778 Nitroreductase.
  
  
 0.605
EAR28122.1
COG0778 Nitroreductase.
  
  
 0.605
EAR28208.1
COG0778 Nitroreductase.
  
  
 0.605
NfnB
Major NAD(P)H-flavin oxidoreductase; COG0778 Nitroreductase.
  
  
 0.605
EAR29108.1
Putative ABC transporter, permease protein; COG0842 ABC-type multidrug transport system, permease component.
  
  
 0.577
EAR29960.1
COG0842 ABC-type multidrug transport system, permease component.
  
  
 0.577
EAR26673.1
COG0842 ABC-type multidrug transport system, permease component.
  
  
 0.577
msrA-2
Peptide methionine sulfoxide reductase MsrA/MsrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.530
Your Current Organism:
Pseudoalteromonas tunicata
NCBI taxonomy Id: 87626
Other names: P. tunicata D2, Pseudoalteromonas sp. D2, Pseudoalteromonas tunicata D2, Pseudoalteromonas tunicata str. D2, Pseudoalteromonas tunicata strain D2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.