STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR27972.1Hypothetical protein. (73 aa)    
Predicted Functional Partners:
PepN
COG0308 Aminopeptidase N.
       0.878
NhaC
COG1757 Na+/H+ antiporter.
       0.829
EAR27973.1
Hypothetical protein.
       0.713
CtpA-2
Periplasmic carboxy-terminal protease with specificity for non-polar C-termini; COG0793 Periplasmic protease; Belongs to the peptidase S41A family.
       0.711
proQ
Putative solute/DNA competence effector; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.
       0.698
EAR27966.1
COG1956 GAF domain-containing protein.
       0.682
EAR27974.1
Hypothetical protein.
       0.663
EAR27967.1
Putative orphan protein.
       0.658
EAR27975.1
Putative orphan protein; COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor.
       0.465
EAR27976.1
COG1033 Predicted exporters of the RND superfamily.
       0.465
Your Current Organism:
Pseudoalteromonas tunicata
NCBI taxonomy Id: 87626
Other names: P. tunicata D2, Pseudoalteromonas sp. D2, Pseudoalteromonas tunicata D2, Pseudoalteromonas tunicata str. D2, Pseudoalteromonas tunicata strain D2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.