STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR28362.1COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases. (340 aa)    
Predicted Functional Partners:
EAR26929.1
Hypothetical protein; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases.
  
     0.765
EAR28363.1
Hypothetical protein.
       0.450
Crr
Putative PTS system protein; COG2190 Phosphotransferase system IIA components.
    
   0.439
EAR28360.1
Transposase IS4 family protein; COG3666 Transposase and inactivated derivatives.
       0.404
EAR28361.1
Transposase IS4 family protein; COG3666 Transposase and inactivated derivatives.
       0.404
Your Current Organism:
Pseudoalteromonas tunicata
NCBI taxonomy Id: 87626
Other names: P. tunicata D2, Pseudoalteromonas sp. D2, Pseudoalteromonas tunicata D2, Pseudoalteromonas tunicata str. D2, Pseudoalteromonas tunicata strain D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.