STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOY92414.1Derived by automated computational analysis using gene prediction method: Protein Homology. (108 aa)    
Predicted Functional Partners:
AOY96030.1
Cytochrome c family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.912
AOY97350.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.908
AOY92413.1
Sulfite dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.682
AOY93248.1
Rieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.574
AOY92410.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.549
AOY94160.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.544
AOY92366.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.539
AOY93542.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.539
AOY92419.1
Sulfur oxidation c-type cytochrome SoxX; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.537
AOY94589.1
Oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.513
Your Current Organism:
Cupriavidus sp. USMAA24
NCBI taxonomy Id: 876364
Other names: C. sp. USMAA2-4, Cupriavidus sp. USMAA2-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.