STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOY96369.1Alanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. (402 aa)    
Predicted Functional Partners:
AOY96368.1
Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.570
AOY97364.1
Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.450
AOY97302.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.448
AOY95853.1
D-aminoacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.447
AOY96181.1
D-aminoacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.443
AOY90690.1
Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.442
AOY96266.1
D-aminoacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.438
AOY96549.1
D-aminoacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.438
AOY90990.1
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.429
AOY96544.1
Microcystin LR degradation protein MlrC-like protein; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.
 
     0.415
Your Current Organism:
Cupriavidus sp. USMAA24
NCBI taxonomy Id: 876364
Other names: C. sp. USMAA2-4, Cupriavidus sp. USMAA2-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.