STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421005_00321Unannotated protein. (360 aa)    
Predicted Functional Partners:
GCA_000421005_00320
Unannotated protein.
      0.845
GCA_000421005_00420
Unannotated protein.
  
 
 0.844
GCA_000421005_00322
Unannotated protein.
 
    0.835
GCA_000421005_00628
Unannotated protein.
   
 
 0.819
GCA_000421005_00498
Unannotated protein.
  
 
 0.792
GCA_000421005_01282
Unannotated protein.
 
  
 
0.790
GCA_000421005_00926
Unannotated protein.
  
 
 0.787
GCA_000421005_00324
Unannotated protein.
       0.786
GCA_000421005_00326
Unannotated protein.
  
    0.775
GCA_000421005_00325
Unannotated protein.
  
    0.773
Your Current Organism:
Clostridiales bacterium NK3B98
NCBI taxonomy Id: 877414
Other names: C. bacterium NK3B98, rumen bacterium NK3B98
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.