STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000701725_01003Unannotated protein. (313 aa)    
Predicted Functional Partners:
GCA_000701725_01001
Unannotated protein.
 
  
 0.609
GCA_000701725_02681
Unannotated protein.
  
     0.581
GCA_000701725_01000
Unannotated protein.
  
  
 0.568
GCA_000701725_00998
Unannotated protein.
  
  
 0.564
GCA_000701725_00999
Unannotated protein.
     
 0.531
GCA_000701725_01002
Unannotated protein.
       0.523
GCA_000701725_01125
Unannotated protein.
  
     0.509
GCA_000701725_02061
Unannotated protein.
  
     0.473
GCA_000701725_00472
Unannotated protein.
  
 
 0.410
GCA_000701725_01487
Unannotated protein.
  
     0.402
Your Current Organism:
Erysipelotrichaceae bacterium NK3D112
NCBI taxonomy Id: 877415
Other names: E. bacterium NK3D112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.