STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421045_01741Unannotated protein. (321 aa)    
Predicted Functional Partners:
GCA_000421045_01740
Unannotated protein.
 
 0.993
GCA_000421045_01742
Unannotated protein.
 
 0.978
GCA_000421045_01852
Unannotated protein.
 
 0.977
GCA_000421045_01409
Unannotated protein.
 
 0.972
GCA_000421045_01412
Unannotated protein.
 
 0.971
GCA_000421045_02722
Unannotated protein.
 
 0.969
GCA_000421045_01413
Unannotated protein.
 
  
  0.956
GCA_000421045_01739
Unannotated protein.
 
  
 
0.942
GCA_000421045_02727
Unannotated protein.
 
 0.941
GCA_000421045_01411
Unannotated protein.
 
 0.934
Your Current Organism:
Lachnospiraceae bacterium NK4A179
NCBI taxonomy Id: 877424
Other names: L. bacterium NK4A179, rumen bacterium NK4A179
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.