STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08261.1PFAM: Amidohydrolase 1; KEGG: mfv:Mfer_0494 amidohydrolase. (415 aa)    
Predicted Functional Partners:
ADZ08262.1
TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; Copper ion-binding; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: mem:Memar_1873 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase.
       0.825
ADZ08379.1
Agmatinase; TIGRFAM: Putative agmatinase; KEGG: ara:Arad_7959 agmatinase; PFAM: Ureohydrolase; Belongs to the arginase family.
  
  
 0.634
ADZ10562.1
Agmatinase; TIGRFAM: Putative agmatinase; KEGG: mth:MTH868 agmatine ureohydrolase; PFAM: Ureohydrolase; Belongs to the arginase family.
  
  
 0.634
ADZ10742.1
Amidohydrolase; TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: gfo:GFO_2325 M20 family peptidase; PFAM: Peptidase M20; Peptidase M20, dimerisation.
 
   
 0.572
ADZ08263.1
KEGG: mpl:Mpal_0132 YHS domain protein; PFAM: YHS; SMART: TRASH.
       0.552
ADZ08260.1
KEGG: hvo:HVO_1924 hypothetical protein.
       0.520
ADZ10443.1
KEGG: mfv:Mfer_0461 S-adenosylhomocysteine deaminase; PFAM: Amidohydrolase 1.
 
  
 0.446
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
  
 0.406
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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