STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08271.1PFAM: Divalent ion tolerance protein, CutA1; KEGG: mth:MTH1509 divalent cation tolerance protein. (106 aa)    
Predicted Functional Partners:
nadE
NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.
       0.871
leuS
TIGRFAM: Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic; KEGG: mst:Msp_0171 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.690
ADZ09182.1
Desulfoferrodoxin; KEGG: mmg:MTBMA_c11510 superoxide reductase; TIGRFAM: Desulfoferrodoxin; Desulfoferrodoxin Dfx; Desulfoferrodoxin, ferrous iron-binding domain; PFAM: Desulfoferrodoxin, ferrous iron-binding domain; Desulfoferrodoxin Dfx.
  
    0.532
ADZ08274.1
KEGG: mth:MTH352 hypothetical protein; PFAM: Cupin 2, conserved barrel; SMART: Cupin 1.
 
     0.530
ADZ08273.1
Arsenite-activated ATPase ArsA; KEGG: mth:MTH1511 arsenical pump-driving ATPase; TIGRFAM: ATPase, anion-transporting.
       0.507
trpF
PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: mfv:Mfer_0095 phosphoribosylanthranilate isomerase; Belongs to the TrpF family.
 
   
 0.486
ADZ09879.1
PFAM: Conserved hypothetical protein, MTH865; KEGG: mae:Maeo_0093 MTH865-like family protein.
  
    0.413
ADZ09248.1
Ferroxidase; KEGG: mmg:MTBMA_c06090 ferritin; PFAM: Ferritin/Dps protein.
  
    0.405
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.