STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08310.1PFAM: 4Fe-4S binding domain; KEGG: mth:MTH1826 hypothetical protein. (368 aa)    
Predicted Functional Partners:
ADZ08643.1
UPF0272 protein; TIGRFAM: Uncharacterised protein family UPF0272; HAMAP: Uncharacterised protein family UPF0272; KEGG: mth:MTH1109 hypothetical protein; PFAM: Uncharacterised protein family UPF0272; Belongs to the LarC family.
 
    0.572
ADZ08648.1
KEGG: mmg:MTBMA_c10340 hypothetical protein.
   
    0.566
ADZ09138.1
KEGG: mmg:MTBMA_c10340 hypothetical protein.
   
    0.566
ADZ09462.1
KEGG: mmg:MTBMA_c10340 hypothetical protein.
   
    0.566
ADZ08662.1
Alcohol dehydrogenase; KEGG: gur:Gura_3532 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type.
  
    0.513
ADZ08308.1
PFAM: Protein of unknown function DUF1211, TMEM175; KEGG: mth:MTH1490 hypothetical protein.
       0.474
ADZ08309.1
KEGG: mth:MTH1892 hypothetical protein.
       0.474
ADZ10732.1
PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; KEGG: mth:MTH1548 NADH dehydrogenase subunit E.
  
  
 0.452
ADZ08311.1
PFAM: Xylose isomerase, TIM barrel domain; KEGG: mmg:MTBMA_c00720 sugar phosphate isomerase/epimerase.
       0.434
ADZ10448.1
TIGRFAM: Conserved hypothetical protein CHP00268; KEGG: mmg:MTBMA_c13730 ATP-utilizing enzyme.
 
    0.404
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.