STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08311.1PFAM: Xylose isomerase, TIM barrel domain; KEGG: mmg:MTBMA_c00720 sugar phosphate isomerase/epimerase. (253 aa)    
Predicted Functional Partners:
ADZ10554.1
Oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: mth:MTH875 3-chlorobenzoate-3,4-dioxygenase dyhydrogenase related protein.
  
  
 0.883
ADZ09513.1
PfkB domain protein; PFAM: Carbohydrate/purine kinase; KEGG: mmg:MTBMA_c08030 energy-converting hydrogenase T, subunit T; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.650
ADZ08909.1
PfkB domain protein; PFAM: Carbohydrate/purine kinase; KEGG: mfv:Mfer_0308 PfkB domain protein; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.649
ADZ08312.1
Transcriptional regulator, PadR-like family; PFAM: Transcription regulator PadR N-terminal-like; KEGG: mmg:MTBMA_c00710 transcriptional regulator.
 
     0.637
ADZ10662.1
TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; KEGG: mmg:MTBMA_c06610 DNA lyase; PFAM: Endonuclease/exonuclease/phosphatase.
     
 0.620
ADZ10391.1
PfkB domain protein; PFAM: Carbohydrate/purine kinase; KEGG: mst:Msp_1258 ribokinase.
  
  
 0.598
ADZ10737.1
PfkB domain protein; PFAM: Carbohydrate/purine kinase; KEGG: mth:MTH1544 ribokinase; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.598
ADZ08314.1
PFAM: ABC-2 type transporter; KEGG: mmg:MTBMA_c00690 ABC transporter, permease component.
 
     0.585
ADZ08313.1
SMART: ATPase, AAA+ type, core; TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit; KEGG: mth:MTH1487 ABC transporter (ATP-binding protein); PFAM: ABC transporter-like.
     
 0.538
ADZ10348.1
Methanogen marker protein 4; TIGRFAM: Methyltransferase Mtx, subunit X; KEGG: mfv:Mfer_0594 methanogen marker protein 4.
  
     0.524
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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