STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08312.1Transcriptional regulator, PadR-like family; PFAM: Transcription regulator PadR N-terminal-like; KEGG: mmg:MTBMA_c00710 transcriptional regulator. (155 aa)    
Predicted Functional Partners:
ADZ08313.1
SMART: ATPase, AAA+ type, core; TIGRFAM: Daunorubicin resistance ABC transporter ATP-binding subunit; KEGG: mth:MTH1487 ABC transporter (ATP-binding protein); PFAM: ABC transporter-like.
  
  
 0.919
ADZ08314.1
PFAM: ABC-2 type transporter; KEGG: mmg:MTBMA_c00690 ABC transporter, permease component.
     
 0.779
ADZ08315.1
KEGG: mmg:MTBMA_c00680 hypothetical protein; PFAM: Pyrrolo-quinoline quinone repeat; SMART: Pyrrolo-quinoline quinone beta-propeller repeat.
 
     0.688
ADZ08311.1
PFAM: Xylose isomerase, TIM barrel domain; KEGG: mmg:MTBMA_c00720 sugar phosphate isomerase/epimerase.
 
     0.637
ADZ09552.1
KEGG: mpd:MCP_1700 putative PadR-like family transcriptional regulator; manually curated; PFAM: Transcription regulator PadR N-terminal-like.
  
     0.477
ADZ09079.1
Regulatory protein MarR; KEGG: mmg:MTBMA_c13170 transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR.
 
  
 0.428
Your Current Organism:
Methanobacterium lacus
NCBI taxonomy Id: 877455
Other names: DSM 24406, JCM 17760, M. lacus, Methanobacterium lacus Borrel et al. 2012, Methanobacterium sp. 17A1, Methanobacterium sp. AL-21, strain 17A1
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